7I21
PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with NegAcid3-Am03
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-10-10 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92124 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 42.581, 42.581, 216.368 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.090 - 1.830 |
R-factor | 0.2427 |
Rwork | 0.239 |
R-free | 0.30459 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.526 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.110 | 1.870 |
High resolution limit [Å] | 1.830 | 1.830 |
Rmerge | 0.171 | 5.454 |
Rmeas | 0.175 | 5.557 |
Rpim | 0.035 | 1.061 |
Total number of observations | 476792 | 30327 |
Number of reflections | 18759 | 1123 |
<I/σ(I)> | 6.8 | 0.2 |
Completeness [%] | 100.0 | |
Redundancy | 25.4 | 27 |
CC(1/2) | 0.998 | 0.207 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.8 | 298 | 30% w/v PEG 2000, 0.2M Ammonium sulfate, 0.1M acetate (pH 4.8) |