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7I1I

PanDDA analysis group deposition -- Main Protease (SARS-CoV-2) in complex with fragment H03 from the F2X-Entry Screen in orthorhombic space group

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-12-06
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9184
Spacegroup nameP 21 21 21
Unit cell lengths67.830, 98.840, 102.550
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.510 - 1.880
R-factor0.21788
Rwork0.216
R-free0.25485
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.519
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.5101.990
High resolution limit [Å]1.8805.6001.880
Rmerge0.1160.0331.448
Rmeas0.1280.0361.625
Total number of observations303495
Number of reflections5593422518690
<I/σ(I)>9.7736.660.98
Completeness [%]98.2
CC(1/2)0.9980.9990.392
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.72910.2 M MIB (sodium malonate, imidazole, and boric acid in the molar ratios 2:3:3) pH 7.7, 23.5 % PEG 1500, 5 % DMSO, 1 mM DTT. Crystal seeds were used to ensure reproducible crystal growth.

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PDB entries from 2025-05-28

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