7HPD
PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0015216-001
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-22 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92124 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 42.584, 42.584, 216.536 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.120 - 1.626 |
R-factor | 0.2464 |
Rwork | 0.245 |
R-free | 0.26950 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.030 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.4 (20-OCT-2021)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 216.510 | 1.640 |
High resolution limit [Å] | 1.610 | 1.610 |
Rmerge | 0.083 | |
Rmeas | 0.085 | 14.217 |
Rpim | 0.017 | 2.818 |
Total number of observations | 693357 | 32517 |
Number of reflections | 27147 | 1301 |
<I/σ(I)> | 12 | 0.1 |
Completeness [%] | 99.8 | |
Redundancy | 25.5 | 25 |
CC(1/2) | 0.999 | 0.318 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.8 | 298 | 30% w/v PEG 2000, 0.2M Ammonium sulfate, 0.1M acetate (pH 4.8) |