7HN5
PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z45617795
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-07-04 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92134 |
Spacegroup name | I 4 |
Unit cell lengths | 95.324, 95.324, 45.590 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 67.400 - 1.320 |
R-factor | 0.1766 |
Rwork | 0.176 |
R-free | 0.19410 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.013 |
RMSD bond angle | 1.885 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.380 | 67.380 | 1.340 |
High resolution limit [Å] | 1.320 | 7.230 | 1.320 |
Rmerge | 0.078 | 0.052 | 1.561 |
Rmeas | 0.082 | 0.055 | 1.748 |
Rpim | 0.023 | 0.017 | 0.756 |
Total number of observations | 549456 | 3868 | 10488 |
Number of reflections | 47626 | 321 | 2064 |
<I/σ(I)> | 15.7 | 55.7 | 0.8 |
Completeness [%] | 98.8 | 99.9 | 87 |
Redundancy | 11.5 | 12 | 5.1 |
CC(1/2) | 0.998 | 0.956 | 0.298 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 4 % PEG 400, 2 M AmmSO4, 0.1 M HEPES pH 8 |