7HG9
PanDDA analysis group deposition -- Crystal structure of HRP-2 PWWP domain in complex with Z131516158
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-19 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.918076 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.580, 42.250, 160.140 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.890 - 1.580 |
R-factor | 0.21346 |
Rwork | 0.211 |
R-free | 0.25409 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.867 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.250 | 1.620 |
High resolution limit [Å] | 1.580 | 1.580 |
Rmerge | 0.077 | 1.680 |
Rmeas | 0.084 | 1.863 |
Rpim | 0.034 | 0.798 |
Total number of observations | 245924 | 15630 |
Number of reflections | 39746 | 2908 |
<I/σ(I)> | 10.5 | 0.9 |
Completeness [%] | 99.9 | |
Redundancy | 6.2 | 5.4 |
CC(1/2) | 0.998 | 0.357 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 277 | 28% PEG MME 2000; 0.15 M ammonium sulfate; 0.1 M sodium acetate pH 4.6 |