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7H6N

Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain -- Crystal structure of Chikungunya virus nsP3 macrodomain in complex with Z1079512010 (CHIKV_MacB-x0295)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-10-06
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.92124
Spacegroup nameP 31
Unit cell lengths87.369, 87.369, 85.724
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution56.790 - 1.520
R-factor0.18273
Rwork0.181
R-free0.21270
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.495
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]56.7301.550
High resolution limit [Å]1.5201.520
Rmerge0.1475.191
Rmeas0.1555.541
Rpim0.0481.921
Total number of observations115595845253
Number of reflections1126035548
<I/σ(I)>11.20.4
Completeness [%]100.0
Redundancy10.38.2
CC(1/2)0.9990.284
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.8293.150.1 M Potassium thiocyanate, 0.1 M Sodium bromide, 0.1 M Tris, pH 7.8, 25 % PEG Smear Broad

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PDB entries from 2024-11-06

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