7H54
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z57473948 (A71EV2A-x1292)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-02-19 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.94054 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 86.070, 56.598, 64.481 |
Unit cell angles | 90.00, 94.68, 90.00 |
Refinement procedure
Resolution | 42.930 - 1.100 |
R-factor | 0.17619 |
Rwork | 0.175 |
R-free | 0.19428 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.720 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.890 | 1.160 |
High resolution limit [Å] | 1.100 | 1.100 |
Rmerge | 0.068 | 1.300 |
Rmeas | 0.073 | 1.465 |
Rpim | 0.028 | 0.662 |
Total number of observations | 784342 | 62093 |
Number of reflections | 119294 | 13221 |
<I/σ(I)> | 10.9 | 0.9 |
Completeness [%] | 94.7 | |
Redundancy | 6.6 | 4.7 |
CC(1/2) | 0.999 | 0.511 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |