7H4Y
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z362043378 (A71EV2A-x1146)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-03 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.94054 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 72.147, 60.656, 32.202 |
Unit cell angles | 90.00, 92.71, 90.00 |
Refinement procedure
Resolution | 36.060 - 2.750 |
R-factor | 0.18723 |
Rwork | 0.185 |
R-free | 0.25384 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.421 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.030 | 2.890 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.296 | 0.952 |
Rmeas | 0.335 | 1.086 |
Rpim | 0.155 | 0.513 |
Total number of observations | 16659 | 2587 |
Number of reflections | 3481 | 534 |
<I/σ(I)> | 3.9 | 2 |
Completeness [%] | 94.5 | |
Redundancy | 4.8 | 4.8 |
CC(1/2) | 0.933 | 0.469 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |