7H4Q
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z59181971 (A71EV2A-x1080)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-03 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.94054 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 72.447, 60.817, 32.373 |
Unit cell angles | 90.00, 93.21, 90.00 |
Refinement procedure
Resolution | 46.550 - 2.030 |
R-factor | 0.21073 |
Rwork | 0.209 |
R-free | 0.25875 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.418 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.550 | 2.140 |
High resolution limit [Å] | 2.030 | 2.030 |
Rmerge | 0.318 | 1.666 |
Rmeas | 0.377 | 1.996 |
Rpim | 0.197 | 1.068 |
Total number of observations | 32020 | 4685 |
Number of reflections | 8863 | 1288 |
<I/σ(I)> | 3 | 1.3 |
Completeness [%] | 97.2 | |
Redundancy | 3.6 | 3.6 |
CC(1/2) | 0.913 | 0.274 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |