7H4O
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with NCL-00024665 (A71EV2A-x1019)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-03 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.94055 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 72.117, 60.498, 32.292 |
Unit cell angles | 90.00, 92.50, 90.00 |
Refinement procedure
Resolution | 46.330 - 2.200 |
R-factor | 0.23744 |
Rwork | 0.235 |
R-free | 0.30070 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.347 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.330 | 2.300 |
High resolution limit [Å] | 2.190 | 2.190 |
Rmerge | 0.405 | 2.673 |
Rmeas | 0.440 | 2.913 |
Rpim | 0.169 | 1.140 |
Total number of observations | 47174 | 6120 |
Number of reflections | 6896 | 948 |
<I/σ(I)> | 4.3 | 0.8 |
Completeness [%] | 95.1 | |
Redundancy | 6.8 | 6.5 |
CC(1/2) | 0.854 | 0.784 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |