7H4J
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z53825020 (A71EV2A-x0875)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-03 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.94054 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 72.729, 60.911, 32.396 |
Unit cell angles | 90.00, 93.07, 90.00 |
Refinement procedure
Resolution | 46.670 - 1.790 |
R-factor | 0.22113 |
Rwork | 0.220 |
R-free | 0.24569 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.467 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.650 | 1.830 |
High resolution limit [Å] | 1.790 | 1.790 |
Rmerge | 0.321 | 2.714 |
Rmeas | 0.347 | 2.949 |
Rpim | 0.130 | 1.138 |
Total number of observations | 93137 | 5158 |
Number of reflections | 13305 | 783 |
<I/σ(I)> | 5.2 | 0.6 |
Completeness [%] | 99.5 | |
Redundancy | 7 | 6.6 |
CC(1/2) | 0.988 | 0.265 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |