7H42
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z124039706 (A71EV2A-x0540)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-10-11 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.94055 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 86.611, 56.422, 32.444 |
Unit cell angles | 90.00, 95.39, 90.00 |
Refinement procedure
Resolution | 47.210 - 1.240 |
R-factor | 0.17392 |
Rwork | 0.173 |
R-free | 0.18770 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.828 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.240 | 1.260 |
High resolution limit [Å] | 1.240 | 1.240 |
Rmerge | 0.145 | 4.276 |
Rmeas | 0.158 | 4.623 |
Rpim | 0.060 | 1.738 |
Total number of observations | 299827 | 15824 |
Number of reflections | 43644 | 2285 |
<I/σ(I)> | 13.1 | 0.9 |
Completeness [%] | 99.0 | |
Redundancy | 6.9 | 6.9 |
CC(1/2) | 0.986 | 0.375 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |