7H3K
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z71580604 (A71EV2A-x0416)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-10-10 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.94055 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 86.188, 56.398, 32.418 |
Unit cell angles | 90.00, 94.87, 90.00 |
Refinement procedure
Resolution | 47.140 - 1.280 |
R-factor | 0.20405 |
Rwork | 0.202 |
R-free | 0.23791 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.539 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.150 | 1.300 |
High resolution limit [Å] | 1.280 | 1.280 |
Rmerge | 0.103 | 2.401 |
Rmeas | 0.111 | 2.606 |
Rpim | 0.042 | 1.000 |
Total number of observations | 271100 | 13012 |
Number of reflections | 39635 | 1910 |
<I/σ(I)> | 9.8 | 0.6 |
Completeness [%] | 99.1 | |
Redundancy | 6.8 | 6.8 |
CC(1/2) | 0.997 | 0.285 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |