7GTF
PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with XST00000754b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 90.465, 90.465, 106.917 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.230 - 1.970 |
R-factor | 0.2172 |
Rwork | 0.215 |
R-free | 0.25920 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.031 |
RMSD bond angle | 1.545 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 63.195 | 63.195 | 2.090 |
High resolution limit [Å] | 1.970 | 5.890 | 1.970 |
Rmerge | 0.118 | 0.036 | 1.451 |
Rmeas | 0.132 | 0.040 | 1.607 |
Total number of observations | 337146 | ||
Number of reflections | 66041 | 2594 | 10865 |
<I/σ(I)> | 11.02 | 38.05 | 1.29 |
Completeness [%] | 95.8 | 99.7 | 97.8 |
CC(1/2) | 0.996 | 0.997 | 0.526 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol |