7GTE
PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with XST00000646b
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 90.413, 90.413, 107.001 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 63.190 - 1.900 |
R-factor | 0.198 |
Rwork | 0.197 |
R-free | 0.23070 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.026 |
RMSD bond angle | 1.614 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 63.189 | 63.189 | 2.020 |
High resolution limit [Å] | 1.900 | 5.680 | 1.900 |
Rmerge | 0.063 | 0.025 | 1.351 |
Rmeas | 0.071 | 0.028 | 1.509 |
Total number of observations | 396927 | ||
Number of reflections | 76758 | 2887 | 12424 |
<I/σ(I)> | 14.09 | 49.51 | 1.07 |
Completeness [%] | 99.7 | 99.9 | 99.3 |
CC(1/2) | 0.999 | 0.999 | 0.541 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol |