7GSR
PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with XST00000055b
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 89.533, 89.533, 106.193 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 62.620 - 1.690 |
R-factor | 0.1956 |
Rwork | 0.195 |
R-free | 0.22480 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.041 |
RMSD bond angle | 1.743 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 77.538 | 77.538 | 1.800 |
High resolution limit [Å] | 1.690 | 5.070 | 1.690 |
Rmerge | 0.055 | 0.031 | 1.029 |
Rmeas | 0.061 | 0.035 | 1.183 |
Total number of observations | 529594 | ||
Number of reflections | 105818 | 3954 | 17023 |
<I/σ(I)> | 13.79 | 45.47 | 1.13 |
Completeness [%] | 99.9 | 100 | 99.7 |
CC(1/2) | 0.999 | 0.999 | 0.498 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol |