7GSM
PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with XST00000437b
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 89.662, 89.662, 106.291 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 62.700 - 2.030 |
R-factor | 0.1981 |
Rwork | 0.196 |
R-free | 0.25400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.034 |
RMSD bond angle | 1.474 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 62.700 | 62.700 | 2.150 |
High resolution limit [Å] | 2.030 | 6.060 | 2.030 |
Rmerge | 0.110 | 0.034 | 1.007 |
Rmeas | 0.123 | 0.038 | 1.120 |
Total number of observations | 322360 | ||
Number of reflections | 61703 | 2315 | 9940 |
<I/σ(I)> | 10.8 | 39.24 | 1.32 |
Completeness [%] | 99.8 | 99.9 | 99.4 |
CC(1/2) | 0.998 | 0.999 | 0.507 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol |