7GK8
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with MAT-POS-dd3ad2b5-2 (Mpro-P0808)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91199 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.190, 98.930, 103.180 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 71.410 - 2.200 |
R-factor | 0.2414 |
Rwork | 0.239 |
R-free | 0.28900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.980 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.4 (20-APR-2021)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 71.410 | 2.260 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.456 | 3.249 |
Rmeas | 0.498 | 3.570 |
Rpim | 0.197 | 1.450 |
Total number of observations | 220842 | 14733 |
Number of reflections | 35603 | 2556 |
<I/σ(I)> | 5.1 | 0.7 |
Completeness [%] | 99.9 | |
Redundancy | 6.2 | 5.8 |
CC(1/2) | 0.980 | 0.301 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 15% PEG 4K, 5% DMSO, 0.1M MES pH 6.5 |