7GH1
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with MAT-POS-2bb0cf2b-1 (Mpro-x12731)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91267 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 111.840, 52.590, 44.540 |
Unit cell angles | 90.00, 102.87, 90.00 |
Refinement procedure
Resolution | 47.370 - 1.520 |
R-factor | 0.1849 |
Rwork | 0.183 |
R-free | 0.21380 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.970 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3 (18-SEP-2020)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.370 | 1.560 |
High resolution limit [Å] | 1.520 | 1.520 |
Rmerge | 0.084 | 1.460 |
Rmeas | 0.101 | 1.843 |
Rpim | 0.055 | 1.112 |
Total number of observations | 123254 | 7325 |
Number of reflections | 38806 | 2835 |
<I/σ(I)> | 7.9 | 0.7 |
Completeness [%] | 99.8 | |
Redundancy | 3.2 | 2.6 |
CC(1/2) | 0.998 | 0.311 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 15% PEG 4K, 5% DMSO, 0.1M MES pH 6.5 |