7GE7
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with ADA-UCB-6c2cb422-3 (Mpro-x11354)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91261 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.833, 53.437, 44.439 |
Unit cell angles | 90.00, 101.02, 90.00 |
Refinement procedure
Resolution | 55.870 - 1.510 |
R-factor | 0.1871 |
Rwork | 0.186 |
R-free | 0.20690 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.020 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3 (20-MAY-2020)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.850 | 1.530 |
High resolution limit [Å] | 1.510 | 1.510 |
Rmerge | 0.094 | 1.074 |
Rmeas | 0.113 | 1.378 |
Rpim | 0.062 | 0.852 |
Total number of observations | 126930 | 5054 |
Number of reflections | 41127 | 2043 |
<I/σ(I)> | 7.5 | 0.6 |
Completeness [%] | 99.7 | |
Redundancy | 3.1 | 2.5 |
CC(1/2) | 0.994 | 0.329 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 15% PEG 4K, 5% DMSO, 0.1M MES pH 6.5 |