7GBB
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with DAN-LON-a5fc619e-3 (Mpro-x10306)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-06-11 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.91258 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 113.932, 53.546, 44.334 |
| Unit cell angles | 90.00, 101.24, 90.00 |
Refinement procedure
| Resolution | 55.870 - 1.737 |
| R-factor | 0.1976 |
| Rwork | 0.196 |
| R-free | 0.23450 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.030 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | BUSTER (2.10.3 (20-MAY-2020)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 55.840 | 1.770 |
| High resolution limit [Å] | 1.740 | 1.740 |
| Rmerge | 0.090 | 1.089 |
| Rmeas | 0.108 | 1.339 |
| Rpim | 0.059 | 0.768 |
| Total number of observations | 85660 | 3954 |
| Number of reflections | 26704 | 1412 |
| <I/σ(I)> | 9.8 | 0.7 |
| Completeness [%] | 98.3 | |
| Redundancy | 3.2 | 2.8 |
| CC(1/2) | 0.996 | 0.298 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 15% PEG 4K, 5% DMSO, 0.1M MES pH 6.5 |
