7GAU
PanDDA analysis group deposition of ground-state model of MAP1LC3B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-08 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.92124 |
Spacegroup name | P 43 |
Unit cell lengths | 61.005, 61.005, 35.485 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.000 - 1.590 |
R-factor | 0.1994 |
Rwork | 0.199 |
R-free | 0.21670 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 8q53 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.554 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 61.000 | 61.000 | 1.620 |
High resolution limit [Å] | 1.590 | 8.700 | 1.590 |
Rmerge | 0.092 | 0.093 | 3.870 |
Rmeas | 0.095 | 0.099 | 4.040 |
Rpim | 0.026 | 0.031 | 1.150 |
Total number of observations | 241587 | 1325 | 10881 |
Number of reflections | 17826 | 125 | 896 |
<I/σ(I)> | 11.9 | 42.7 | 0.3 |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 13.6 | 10.6 | 12.1 |
CC(1/2) | 0.997 | 0.989 | 0.307 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.7 | 293 | 36% PEG 8000, 0.1M acetate pH 4.7 |