7GAO
PanDDA analysis group deposition -- Crystal Structure of MAP1LC3B in complex with Z57450788
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92124 |
Spacegroup name | P 43 |
Unit cell lengths | 61.070, 61.070, 35.296 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.580 - 1.690 |
R-factor | 0.1933 |
Rwork | 0.192 |
R-free | 0.21810 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 8q53 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.459 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.560 | 30.560 | 1.720 |
High resolution limit [Å] | 1.690 | 9.110 | 1.690 |
Rmerge | 0.262 | ||
Rmeas | 0.273 | 0.154 | 13.865 |
Rpim | 0.074 | 0.047 | 3.716 |
Total number of observations | 201357 | 1157 | 10272 |
Number of reflections | 14738 | 107 | 749 |
<I/σ(I)> | 10.2 | 42.9 | 0.5 |
Completeness [%] | 99.9 | 98.6 | 99.1 |
Redundancy | 13.7 | 10.8 | 13.7 |
CC(1/2) | 0.997 | 0.996 | 0.345 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.7 | 293 | 36% PEG 8000, 0.1M acetate pH 4.7 |