7GAA
PanDDA analysis group deposition -- Crystal Structure of MAP1LC3B in complex with Z1198233191
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92124 |
Spacegroup name | P 43 |
Unit cell lengths | 60.587, 60.587, 35.927 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.920 - 2.030 |
R-factor | 0.1924 |
Rwork | 0.190 |
R-free | 0.24850 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 8q53 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.547 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.910 | 30.910 | 2.080 |
High resolution limit [Å] | 2.030 | 9.080 | 2.030 |
Rmerge | 0.186 | ||
Rmeas | 0.194 | 0.075 | 11.319 |
Rpim | 0.053 | 0.022 | 3.000 |
Total number of observations | 116879 | 1137 | 8961 |
Number of reflections | 8621 | 108 | 641 |
<I/σ(I)> | 12.3 | 57.7 | 0.4 |
Completeness [%] | 100.0 | 98.6 | 100 |
Redundancy | 13.6 | 10.5 | 14 |
CC(1/2) | 0.999 | 0.999 | 0.363 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.7 | 293 | 36% PEG 8000, 0.1M acetate pH 4.7 |