7G74
Crystal Structure of rat Autotaxin in complex with 4-[[4-[[6-(4-acetylpiperazin-1-yl)-4-oxoquinazolin-3-yl]methyl]triazol-1-yl]methyl]-2-fluorobenzonitrile
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X10SA |
| Synchrotron site | SLS |
| Beamline | X10SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-07-18 |
| Detector | PSI PILATUS 6M |
| Wavelength(s) | 1.000010 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 84.472, 92.279, 120.246 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.980 - 1.820 |
| R-factor | 0.1839 |
| Rwork | 0.182 |
| R-free | 0.22230 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | inhouse model |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.613 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 48.980 | 48.980 | 1.870 |
| High resolution limit [Å] | 1.820 | 8.140 | 1.820 |
| Rmerge | 0.122 | 0.025 | 1.868 |
| Rmeas | 0.132 | 0.028 | 2.036 |
| Total number of observations | 565313 | ||
| Number of reflections | 84843 | 1081 | 6204 |
| <I/σ(I)> | 11.62 | 47.29 | 1.02 |
| Completeness [%] | 99.9 | 99.1 | 99.9 |
| Redundancy | 6.663 | 6.135 | 6.361 |
| CC(1/2) | 0.998 | 0.999 | 0.390 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 15.3 mg/mL protein in 20mM BICINE/NaOH pH8.5, 150mM NaCl, 0.02% NaN3 mixed 50-70% with 50-30% reservoir consisting of 11-17% PEG3350, 0.1M Na-acetate pH4.5, 0.2M Ca-acetate, total volume 200nL |






