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7G6N

Crystal Structure of rat Autotaxin in complex with 3-[5-cyclopropyl-6-(oxan-4-yloxy)pyridin-3-yl]-4-methyl-1H-1,2,4-triazol-5-one

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2014-02-10
DetectorPSI PILATUS 6M
Wavelength(s)1.000070
Spacegroup nameP 21 21 21
Unit cell lengths84.281, 91.405, 119.929
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.090 - 1.810
R-factor0.1949
Rwork0.193
R-free0.23300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.013
RMSD bond angle1.567
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0048)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.09043.0901.860
High resolution limit [Å]1.8108.0901.810
Rmerge0.1070.0242.256
Rmeas0.1160.0262.439
Total number of observations566160
Number of reflections8498910816239
<I/σ(I)>12.149.680.89
Completeness [%]99.998.899.8
Redundancy6.6625.7516.846
CC(1/2)0.9990.9990.336
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.529315.3 mg/mL protein in 20mM BICINE/NaOH pH8.5, 150mM NaCl, 0.02% NaN3 mixed 50-70% with 50-30% reservoir consisting of 11-17% PEG3350, 0.1M Na-acetate pH4.5, 0.2M Ca-acetate, total volume 200nL

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