7FU7
Crystal Structure of human cyclic GMP-AMP synthase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-16 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.999830 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 45.015, 59.359, 162.405 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.360 - 2.240 |
R-factor | 0.2238 |
Rwork | 0.223 |
R-free | 0.24630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.360 | 59.360 | 2.310 |
High resolution limit [Å] | 2.250 | 10.060 | 2.250 |
Rmerge | 0.037 | 0.022 | 2.008 |
Rmeas | 0.040 | 0.024 | 2.169 |
Total number of observations | 140049 | ||
Number of reflections | 21454 | 295 | 1539 |
<I/σ(I)> | 19.95 | 65 | 0.86 |
Completeness [%] | 99.9 | 97 | 100 |
Redundancy | 6.528 | 5.247 | 6.914 |
CC(1/2) | 1.000 | 0.999 | 0.358 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 10-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals |