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7FU2

Crystal Structure of human cyclic GMP-AMP synthase in complex with 6-(2-chloro-5-fluoro-4-methylphenyl)-1H-benzimidazole-4-carboxylic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-08
DetectorPSI PILATUS 6M
Wavelength(s)1.000030
Spacegroup nameP 21 2 21
Unit cell lengths43.142, 58.503, 161.989
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.420 - 2.300
R-factor0.251
Rwork0.249
R-free0.28700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.008
RMSD bond angle1.020
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.7)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]58.50047.4202.360
High resolution limit [Å]2.30010.2902.300
Rmerge0.0480.0183.873
Rmeas0.0530.0204.361
Total number of observations128382
Number of reflections188162691236
<I/σ(I)>15.2259.830.24
Completeness [%]98.899.689.3
Redundancy6.8235.2714.628
CC(1/2)1.0001.0000.121
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729310-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals.

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PDB entries from 2024-11-06

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