7FU1
Crystal Structure of human cyclic GMP-AMP synthase in complex with 5-[3-[[(5-bromo-2-hydroxybenzoyl)amino]methyl]phenyl]-2-methylpyrazole-3-carboxylic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-08 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000030 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 45.355, 59.530, 162.596 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.530 - 2.074 |
R-factor | 0.2253 |
Rwork | 0.223 |
R-free | 0.27570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.530 | 59.530 | 2.130 |
High resolution limit [Å] | 2.070 | 9.280 | 2.070 |
Rmerge | 0.077 | 0.037 | 6.743 |
Rmeas | 0.084 | 0.041 | 7.262 |
Total number of observations | 176032 | ||
Number of reflections | 27059 | 380 | 1970 |
<I/σ(I)> | 9.61 | 24.61 | 0.45 |
Completeness [%] | 98.0 | 99.2 | 97.7 |
Redundancy | 6.505 | 6.068 | 7.259 |
CC(1/2) | 0.998 | 0.997 | 0.252 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 10-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals. |