7FTY
Crystal Structure of human cyclic GMP-AMP synthase in complex with 2-[(4-phenylphenyl)methylamino]-5-propyl-4H-[1,2,4]triazolo[1,5-a]pyrimidin-7-one:2,2,2-trifluoroacetic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-06 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.999890 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 45.056, 59.243, 164.242 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 82.120 - 2.300 |
R-factor | 0.233 |
Rwork | 0.230 |
R-free | 0.29000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.010 |
RMSD bond angle | 1.130 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.7) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 82.120 | 82.120 | 2.360 |
High resolution limit [Å] | 2.300 | 10.290 | 2.300 |
Rmerge | 0.043 | 0.019 | 3.054 |
Rmeas | 0.047 | 0.021 | 3.309 |
Total number of observations | 129617 | ||
Number of reflections | 20355 | 290 | 1477 |
<I/σ(I)> | 16.1 | 48.63 | 0.6 |
Completeness [%] | 99.9 | 99 | 100 |
Redundancy | 6.368 | 5.334 | 6.712 |
CC(1/2) | 0.999 | 0.999 | 0.169 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 10-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals. |