7FTT
Crystal Structure of human cyclic GMP-AMP synthase in complex with 5-bromo-N-[[2-fluoro-5-(1-methylpyrazol-4-yl)phenyl]methyl]-2-hydroxybenzamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000030 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 218.774, 46.229, 89.751 |
Unit cell angles | 90.00, 110.39, 90.00 |
Refinement procedure
Resolution | 56.149 - 2.235 |
R-factor | 0.2125 |
Rwork | 0.209 |
R-free | 0.28700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 84.130 | 56.149 | 2.290 |
High resolution limit [Å] | 2.240 | 10.000 | 2.240 |
Rmerge | 0.109 | 0.025 | 3.892 |
Rmeas | 0.128 | 0.030 | 4.543 |
Total number of observations | 152973 | ||
Number of reflections | 41201 | 515 | 2986 |
<I/σ(I)> | 6.95 | 34.2 | 0.32 |
Completeness [%] | 99.6 | 99 | 99 |
Redundancy | 3.713 | 3.309 | 3.73 |
CC(1/2) | 0.999 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 10-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals |