7FTH
Crystal Structure of human cyclic GMP-AMP synthase in complex with cGAMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-09 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 48.182, 59.476, 125.603 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.986 - 2.550 |
R-factor | 0.1939 |
Rwork | 0.191 |
R-free | 0.25590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.008 |
RMSD bond angle | 1.040 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.11_2558) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.990 | 44.986 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.130 | 0.926 |
Rmeas | 0.154 | 0.073 |
Total number of observations | 87646 | |
Number of reflections | 12367 | 178 |
<I/σ(I)> | 8.44 | 0.81 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.11 | 7.34 |
CC(1/2) | 0.997 | 0.993 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 10-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals. |