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7FSD

Structure of liver pyruvate kinase in complex with allosteric modulator 44

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-09-17
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.91788
Spacegroup nameC 1 2 1
Unit cell lengths208.219, 112.810, 188.749
Unit cell angles90.00, 91.85, 90.00
Refinement procedure
Resolution104.060 - 1.769
R-factor0.201
Rwork0.200
R-free0.21700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.850
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4 (16-JUL-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]104.055104.0551.890
High resolution limit [Å]1.7695.2131.769
Rmerge0.0600.0310.796
Rpim0.0360.0190.467
Total number of observations1270263
Number of reflections3377511688716889
<I/σ(I)>10.628.21.5
Completeness [%]95.4
Redundancy3.83.63.9
CC(1/2)0.9990.9990.658
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291100 mM HEPES/MOPS, 10% PEG8000, 20% ethylene glycol, 10 mM phenylalanine, 20 mM sodium oxalate

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