7FRH
PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with Z2856434762
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 277 |
Detector technology | PIXEL |
Collection date | 2019-07-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96874 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 89.618, 89.618, 106.406 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 62.700 - 1.840 |
R-factor | 0.1636 |
Rwork | 0.162 |
R-free | 0.19400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.575 |
Data reduction software | DIALS |
Data scaling software | xia2.multiplex |
Phasing software | DIMPLE |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 62.700 | 62.740 | 1.870 |
High resolution limit [Å] | 1.840 | 4.990 | 1.840 |
Rmerge | 0.498 | 0.333 | 4.008 |
Rmeas | 0.521 | 0.351 | 4.210 |
Total number of observations | 484521 | ||
Number of reflections | 43422 | 2338 | 2149 |
<I/σ(I)> | 5.8 | 18.6 | 0.5 |
Completeness [%] | 100.0 | 100 | 99.95 |
CC(1/2) | 0.936 | 0.816 | 0.264 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M HEPES, 0.3 M magnesium acetate, 13.5% PEG 8000, 2% ethanol, and 1 mM BME |