7FRE
PanDDA analysis group deposition -- Crystal structure of PTP1B after initial refinement with no ligand modeled
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 278 |
Detector technology | PIXEL |
Collection date | 2017-06-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 89.660, 89.660, 106.390 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.870 - 1.850 |
R-factor | 0.1597 |
Rwork | 0.159 |
R-free | 0.19020 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | DIMPLE |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 62.710 | 1.900 | |
High resolution limit [Å] | 1.850 | 8.270 | 1.850 |
Rmerge | 0.084 | 0.037 | 1.239 |
Rmeas | 0.089 | 0.039 | 1.326 |
Total number of observations | 413061 | ||
Number of reflections | 42721 | 540 | 3133 |
<I/σ(I)> | 14.28 | 53.12 | 1.09 |
Completeness [%] | 100.0 | 98.9 | 100 |
CC(1/2) | 0.999 | 0.999 | 0.594 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M HEPES, 0.3 M magnesium acetate, 13.5% PEG 8000, 2% ethanol, and 1 mM BME |