7FQV
PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with XST00000847b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 278 |
Detector technology | PIXEL |
Collection date | 2017-06-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 89.630, 89.630, 106.470 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.940 - 2.040 |
R-factor | 0.1886 |
Rwork | 0.187 |
R-free | 0.22270 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.547 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | DIMPLE |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 62.720 | 2.090 | |
High resolution limit [Å] | 2.040 | 9.120 | 2.040 |
Rmerge | 0.131 | 0.053 | 0.954 |
Rmeas | 0.150 | 0.061 | 1.091 |
Total number of observations | 127888 | ||
Number of reflections | 31334 | 402 | 2274 |
<I/σ(I)> | 6.2 | 20.3 | 1.01 |
Completeness [%] | 97.9 | 96.6 | 97.3 |
CC(1/2) | 0.994 | 0.995 | 0.520 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M HEPES, 0.3 M magnesium acetate, 13.5% PEG 8000, 2% ethanol, and 1 mM BME |