7FCS
Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
Synchrotron site | RRCAT INDUS-2 |
Beamline | PX-BL21 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-02-15 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.870, 53.493, 85.776 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.890 - 1.600 |
R-factor | 0.1896 |
Rwork | 0.188 |
R-free | 0.21580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gs9 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.034 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.390 | 45.390 | 1.630 |
High resolution limit [Å] | 1.600 | 8.760 | 1.600 |
Rmerge | 0.036 | 0.035 | 0.699 |
Rmeas | 0.040 | 0.042 | 0.784 |
Rpim | 0.018 | 0.022 | 0.349 |
Total number of observations | 120391 | 687 | 6045 |
Number of reflections | 25447 | 183 | 1261 |
<I/σ(I)> | 20.4 | 44.9 | 2.1 |
Completeness [%] | 99.6 | 94.3 | 100 |
Redundancy | 4.7 | 3.8 | 4.8 |
CC(1/2) | 0.999 | 0.995 | 0.731 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5.15 | 294 | 100 mM sodium cacodylate, 28% PEG 400 |