7FBD
De novo design protein D53 with MBP tag
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-18 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5406 |
Spacegroup name | H 3 2 |
Unit cell lengths | 158.469, 158.469, 266.194 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 13.081 - 2.850 |
R-factor | 0.2308 |
Rwork | 0.228 |
R-free | 0.27730 |
Structure solution method | MIR |
RMSD bond length | 0.010 |
RMSD bond angle | 0.970 |
Data reduction software | HKL-3000 |
Data scaling software | SCALA (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.10) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 89.030 | 89.030 | 2.750 |
High resolution limit [Å] | 2.605 | 8.240 | 2.610 |
Rmerge | 0.506 | 0.358 | 1.506 |
Rmeas | 0.522 | 0.368 | 1.564 |
Rpim | 0.125 | 0.084 | 0.421 |
Total number of observations | 24056 | 79709 | |
Number of reflections | 29930 | 1375 | 5820 |
<I/σ(I)> | 5.7 | 8.9 | 2.3 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 16.8 | 17.5 | 13.7 |
CC(1/2) | 0.973 | 0.976 | 0.792 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 289 | 2.2M Sodium malonate pH 7.0 |