7F8R
Crystal structure of human soluble CLIC1 with catalytic cysteine (Cys24) in sulphonic acid form.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-10-06 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.020, 70.655, 82.412 |
Unit cell angles | 90.00, 90.13, 90.00 |
Refinement procedure
Resolution | 42.060 - 2.510 |
R-factor | 0.1781 |
Rwork | 0.175 |
R-free | 0.23560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1k0m |
RMSD bond length | 0.009 |
RMSD bond angle | 1.602 |
Data reduction software | XDS (Feb 5, 2021 (BUILT 20210323)) |
Data scaling software | autoPROC (0.7.4) |
Phasing software | PHENIX (1.16-3549) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 82.412 | 82.412 | 2.549 |
High resolution limit [Å] | 2.503 | 6.869 | 2.503 |
Rmerge | 0.062 | 0.029 | 0.442 |
Rmeas | 0.071 | 0.034 | 0.509 |
Rpim | 0.035 | 0.017 | 0.249 |
Total number of observations | 66696 | 3023 | 3256 |
Number of reflections | 16309 | 814 | 815 |
<I/σ(I)> | 16.2 | 37.1 | 3.2 |
Completeness [%] | 97.2 | 97.4 | 94 |
Redundancy | 4.1 | 3.7 | 4 |
CC(1/2) | 0.998 | 0.999 | 0.897 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 0.02M Sodium potassium phosphate, 0.1M Bis-Tris propane pH 6.5, 20% PEG 3350 |