7F77
Crystal structure of glutamate dehydrogenase 3 from Candida albicans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9789 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 94.542, 94.542, 334.320 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.518 - 3.086 |
R-factor | 0.2433 |
Rwork | 0.241 |
R-free | 0.29030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xvx |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MoRDa |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.210 |
High resolution limit [Å] | 3.080 | 6.670 | 3.100 |
Rmerge | 0.134 | 0.064 | 1.050 |
Rmeas | 0.142 | 0.069 | 1.110 |
Rpim | 0.046 | 0.023 | 0.345 |
Number of reflections | 26983 | 2797 | 2682 |
<I/σ(I)> | 4.4 | ||
Completeness [%] | 93.3 | 88 | 94.9 |
Redundancy | 8 | 7.4 | 8.3 |
CC(1/2) | 0.995 | 0.720 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 3.5 | 289 | 0.1 M Sodium Malonate, pH 3.5, and 17% PEG 3350 |