7F6U
Crystal structure of metal-citrate-binding mutant (Y221A) protein (MctA) of ABC transporter in apo state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-08-09 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 44.420, 108.610, 163.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.680 - 1.750 |
R-factor | 0.2054 |
Rwork | 0.204 |
R-free | 0.23620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7f6e |
RMSD bond length | 0.020 |
RMSD bond angle | 2.134 |
Data reduction software | MOSFLM (7.3.0) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.300 | 54.300 | 1.780 |
High resolution limit [Å] | 1.750 | 9.090 | 1.750 |
Rmerge | 0.088 | 0.053 | 0.501 |
Rmeas | 0.093 | 0.057 | 0.537 |
Rpim | 0.032 | 0.021 | 0.192 |
Total number of observations | 324728 | 2452 | 16706 |
Number of reflections | 40385 | 341 | 2190 |
<I/σ(I)> | 13.2 | 25.4 | 2.5 |
Completeness [%] | 100.0 | 99.4 | 100 |
Redundancy | 8 | 7.2 | 7.6 |
CC(1/2) | 0.997 | 0.998 | 0.907 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.5 | 293 | 0.2 M ammonium sulfate, 0.1 M Sodium cacodylate trihydrate pH 6.5, 30% (w/v) PEG 8000 |