7F6P
Crystal structure of metal-citrate-binding mutant (D28A) protein (MctA) of ABC transporter endogenously bound to citrate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-12-29 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.310, 146.260, 79.090 |
Unit cell angles | 90.00, 99.89, 90.00 |
Refinement procedure
Resolution | 73.240 - 2.150 |
R-factor | 0.1757 |
Rwork | 0.174 |
R-free | 0.21440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7f6e |
RMSD bond length | 0.013 |
RMSD bond angle | 1.708 |
Data reduction software | MOSFLM (7.3.0) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 73.240 | 73.130 | 2.210 |
High resolution limit [Å] | 2.150 | 9.120 | 2.150 |
Rmerge | 0.091 | 0.031 | 0.596 |
Rmeas | 0.100 | 0.034 | 0.656 |
Rpim | 0.041 | 0.014 | 0.271 |
Total number of observations | 4179 | 21756 | |
Number of reflections | 52451 | 741 | 4081 |
<I/σ(I)> | 12.7 | 29.6 | 3.1 |
Completeness [%] | 95.5 | 99.6 | 91.4 |
Redundancy | 5.5 | 5.6 | 5.3 |
CC(1/2) | 0.997 | 0.998 | 0.851 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 293 | 0.2 M ammonium phosphate dibasic, 20% PEG 3350 |