7F6O
Crystal structure of metal-citrate-binding mutant (S26A) protein (MctA) of ABC transporter endogenously bound to Mn2+-citrate complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-08-02 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.730, 100.130, 143.340 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.280 - 2.500 |
R-factor | 0.1975 |
Rwork | 0.194 |
R-free | 0.26520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7f6e |
RMSD bond length | 0.012 |
RMSD bond angle | 1.782 |
Data reduction software | MOSFLM (7.3.0) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (3.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.650 | 71.650 | 2.600 |
High resolution limit [Å] | 2.500 | 9.010 | 2.500 |
Rmerge | 0.230 | 0.135 | 0.564 |
Rmeas | 0.248 | 0.147 | 0.610 |
Rpim | 0.092 | 0.057 | 0.227 |
Total number of observations | 168215 | 3873 | 17862 |
Number of reflections | 23063 | 574 | 2526 |
<I/σ(I)> | 6.4 | 9.4 | 3 |
Completeness [%] | 99.9 | 99.6 | 99.7 |
Redundancy | 7.3 | 6.7 | 7.1 |
CC(1/2) | 0.971 | 0.980 | 0.862 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M ammonium fluoride, 20% PEG 3350 |