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7F5K

Crystal structure of TCR4-1 ectodomain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]95
Detector technologyPIXEL
Collection date2021-05-19
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.07
Spacegroup nameP 21 21 21
Unit cell lengths64.874, 73.790, 170.337
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.722 - 3.000
R-factor0.229020807595
Rwork0.225
R-free0.31084
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7ea6
RMSD bond length0.011
RMSD bond angle1.340
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.7223.160
High resolution limit [Å]3.0003.000
Rmerge0.1850.973
Rmeas0.2001.067
Rpim0.0750.430
Number of reflections170682452
<I/σ(I)>9.7
Completeness [%]99.999.9
Redundancy6.96.1
CC(1/2)0.9900.651
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52930.1M Bis-tris (pH 5.5), 0.2M lithium acetate, 17% (w/v) polyethylene glycol 10000

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