Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7EZE

Thorarchaeota Rab GTP-gamma-S/Mg2+ (soak)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE TPS 05A
Synchrotron siteNSRRC
BeamlineTPS 05A
Temperature [K]100
Detector technologyCCD
Collection date2021-02-16
DetectorRAYONIX MX-300
Wavelength(s)1.0
Spacegroup nameP 31
Unit cell lengths69.133, 69.133, 66.927
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.960 - 1.950
Rwork0.166
R-free0.20090
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7ezb
RMSD bond length0.003
RMSD bond angle0.642
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (v1.17.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.980
High resolution limit [Å]1.9501.950
Rmerge0.0870.820
Rmeas0.0960.964
Rpim0.0410.498
Number of reflections255101304
<I/σ(I)>16.71.2
Completeness [%]97.8
Redundancy5.4
CC(1/2)0.507
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293100 mM MES, pH 5.5, 250 mM NaCl, 13% PEG 8000, 5 mM GTP soaked with 10 mM GTP gamma-S, 15 mM MgCl2 (1 h)

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon