7EZE
Thorarchaeota Rab GTP-gamma-S/Mg2+ (soak)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-02-16 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 |
Unit cell lengths | 69.133, 69.133, 66.927 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.960 - 1.950 |
Rwork | 0.166 |
R-free | 0.20090 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ezb |
RMSD bond length | 0.003 |
RMSD bond angle | 0.642 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (v1.17.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.980 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.087 | 0.820 |
Rmeas | 0.096 | 0.964 |
Rpim | 0.041 | 0.498 |
Number of reflections | 25510 | 1304 |
<I/σ(I)> | 16.7 | 1.2 |
Completeness [%] | 97.8 | |
Redundancy | 5.4 | |
CC(1/2) | 0.507 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM MES, pH 5.5, 250 mM NaCl, 13% PEG 8000, 5 mM GTP soaked with 10 mM GTP gamma-S, 15 mM MgCl2 (1 h) |