7EX9
Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 28
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-01-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.855, 70.763, 70.923 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.420 - 1.750 |
R-factor | 0.1856 |
Rwork | 0.185 |
R-free | 0.20160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2xi5 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19_4080) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.810 |
High resolution limit [Å] | 1.750 | 3.770 | 1.750 |
Rmerge | 0.052 | 0.032 | 0.381 |
Rmeas | 0.060 | 0.038 | 0.458 |
Rpim | 0.030 | 0.020 | 0.249 |
Total number of observations | 77608 | ||
Number of reflections | 20986 | 2096 | 2056 |
<I/σ(I)> | 15.1 | ||
Completeness [%] | 97.7 | 90.2 | 98.5 |
Redundancy | 3.7 | 3.4 | 3.2 |
CC(1/2) | 0.998 | 0.822 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5.1 | 289 | PEG 3350 |