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7EX2

Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with L-742,001 (methyl ester form)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-01
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9792
Spacegroup nameP 1 21 1
Unit cell lengths40.409, 70.804, 69.860
Unit cell angles90.00, 90.06, 90.00
Refinement procedure
Resolution26.440 - 3.100
R-factor0.1826
Rwork0.179
R-free0.22710
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2xi5
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19_4080)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.210
High resolution limit [Å]3.1006.6703.100
Rmerge0.1040.0590.252
Rmeas0.1210.0670.293
Rpim0.0600.0320.146
Total number of observations22253
Number of reflections6248613618
<I/σ(I)>6.9
Completeness [%]85.181.284.8
Redundancy3.63.53.5
CC(1/2)0.9970.895
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION5.3289PEG 3350

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