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7EWZ

Crystal structure of Ebinur Lake virus cap snatching endonuclease (D92A mutant)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyPIXEL
Collection date2020-06-13
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9792
Spacegroup nameP 1 21 1
Unit cell lengths40.871, 72.189, 71.868
Unit cell angles90.00, 90.55, 90.00
Refinement procedure
Resolution27.050 - 2.050
R-factor0.2289
Rwork0.227
R-free0.27130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2xi5
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19_4080)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.120
High resolution limit [Å]2.0504.4202.050
Rmerge0.0780.0610.549
Rmeas0.0870.0690.605
Rpim0.0380.0310.249
Total number of observations130729
Number of reflections2496126652014
<I/σ(I)>12.2
Completeness [%]94.598.476.5
Redundancy5.254.7
CC(1/2)0.9940.910
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION4.9289PEG 3350

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