7EW9
GDP-bound KRAS G12D in complex with TH-Z816
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | LIQUID ANODE |
Source details | BRUKER METALJET |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2020-11-12 |
Detector | BRUKER PHOTON 100 |
Wavelength(s) | 1.34138 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.014, 103.381, 56.269 |
Unit cell angles | 90.00, 106.40, 90.00 |
Refinement procedure
Resolution | 29.050 - 2.130 |
R-factor | 0.2049 |
Rwork | 0.201 |
R-free | 0.25680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4epr |
Data reduction software | SAINT |
Data scaling software | SADABS |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.160 |
High resolution limit [Å] | 2.130 | 2.130 |
Rmerge | 0.072 | 0.420 |
Number of reflections | 56590 | 1177 |
<I/σ(I)> | 14.1 | 2.41 |
Completeness [%] | 99.9 | 98.5 |
Redundancy | 6.95 | 3.97 |
CC(1/2) | 1.000 | 0.810 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8.5 | 293.15 | 0.2 M sodium acetate, 0.1 M Tris, pH 8.5, 26 % (w/v) PEG 3350 |