7EVQ
Crystal structure of C-terminal half of lactoferrin obtained by limited proteolysis using pepsin at 2.6 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-24 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9655 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 153.246, 81.690, 110.227 |
Unit cell angles | 90.00, 129.91, 90.00 |
Refinement procedure
Resolution | 45.120 - 2.600 |
R-factor | 0.2296 |
Rwork | 0.227 |
R-free | 0.28410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1BFL |
RMSD bond length | 0.010 |
RMSD bond angle | 1.418 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.120 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.062 | 0.450 |
Rmeas | 0.078 | 0.480 |
Rpim | 0.039 | 0.260 |
Number of reflections | 41125 | 1136 |
<I/σ(I)> | 0.97 | 2.9 |
Completeness [%] | 64.8 | 22.2 |
Redundancy | 3 | 2.4 |
CC(1/2) | 0.990 | 0.840 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | Magnesium Acetate 20%, PEG 3350. |